Your personal bot for Michigan Imputation Server and TOPMed Imputation Server.
You will need the following things properly installed on your computer.
- Java 8 or higher
imputation-bot works on Linux, macOS and Windows.
Download and Install
Linux or macOS
Download and install the latest version from our download page using the following commands:
curl -sL imputationbot.now.sh | bash
It will create the
imputationbot executable file in the current directory. Optionally, move the
imputationbot file to a directory accessible by your
Test the installation with the following command:
The documentation is available at http://imputationbot.readthedocs.io.
All releases are also available on Github.
Download the latest version of
imputationbot-X.X.X-windows.zip from our download page.
Open the zip file and extract it content to a folder of choice.
Open the command-line, navigate to your folder where you extracted the exe file.
Test the installation with following command:
It will output something similar to the text shown below:
imputation-bot 1.0.0 🤖 https://imputationserver.sph.umich.edu (c) 2019-2020 Lukas Forer, Sebastian Schoenherr and Christian Fuchsberger Built by lukas on 2020-09-01T11:31:10Z
Now you are ready to configure imputation-bot and impute your GWAS data. Read the Getting started section to learn more about how to submit your first job.